Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP20Matrix metallopeptidase 20. (483 aa)    
Predicted Functional Partners:
KLK4
Kallikrein related peptidase 4; Belongs to the peptidase S1 family.
     
 0.923
MMP13
Matrix metallopeptidase 13.
   
 0.875
ENAM
Enamelin.
   
  
 0.824
AMBN
Ameloblastin.
   
  
 0.802
WDR72
WD repeat domain 72.
      
 0.727
ODAM
Odontogenic, ameloblast associated.
      
 0.714
ENSPPAP00000017012
Uncharacterized protein.
   
 0.691
AMTN
Amelotin.
   
  
 0.685
SPP1
Secreted phosphoprotein 1.
   
 0.672
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.671
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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