Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM56Tripartite motif containing 56. (755 aa)    
Predicted Functional Partners:
STING1
Stimulator of interferon protein.
   
 0.851
TRIM32
Tripartite motif containing 32.
    
 0.694
LOC100967637
B30.2/SPRY domain-containing protein.
      
 0.641
TRIM50
Uncharacterized protein.
      
 0.626
CNBP
Uncharacterized protein.
   
   0.592
PCBP1
Poly(rC) binding protein 1.
    
 0.578
TRIM25
Tripartite motif containing 25.
      
0.572
MUL1
Mitochondrial E3 ubiquitin protein ligase 1.
      
 0.567
TRIM38
Tripartite motif containing 38.
   
  
 0.560
TRIM41
Tripartite motif containing 41.
      
 0.555
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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