STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP12Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family. (372 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
   
 0.999
WDR20
WD repeat domain 20.
   
 0.991
KXD1
Ubiquitin-like domain-containing protein.
    
 0.912
DMWD
DM1 locus, WD repeat containing.
   
 0.885
PHLPP1
Uncharacterized protein.
    
 
 0.859
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2.
    
 
 0.834
USP46
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
  
 
 
0.745
AR
Androgen receptor.
    
 0.734
RAD51AP1
RAD51 associated protein 1.
   
 
 0.729
ZUP1
Zinc finger containing ubiquitin peptidase 1.
      
 0.710
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.