LCE2D protein (Pan paniscus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LCE2D

Late cornified envelope 2D. (110 aa)

Predicted Functional Partners:

LCE6A

0.992

LCE1A

0.991

LCE2C

0.988

LCE1F

0.885

MAGEA11

0.737

LCE3E

0.713

LCE3D

0.706

LCE3C

0.654

FCGR2A

0.622

GSTM1

0.599

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FCGR2A	GSTM1	ENSPPAP00000015263	ENSPPAP00000021994	Fc fragment of IgG receptor IIa.	Uncharacterized protein; Belongs to the GST superfamily.	0.653
FCGR2A	LCE2D	ENSPPAP00000015263	ENSPPAP00000001771	Fc fragment of IgG receptor IIa.	Late cornified envelope 2D.	0.622
FCGR2A	MAGEA11	ENSPPAP00000015263	ENSPPAP00000013109	Fc fragment of IgG receptor IIa.	MAGE family member A11.	0.802
GSTM1	FCGR2A	ENSPPAP00000021994	ENSPPAP00000015263	Uncharacterized protein; Belongs to the GST superfamily.	Fc fragment of IgG receptor IIa.	0.653
GSTM1	LCE2D	ENSPPAP00000021994	ENSPPAP00000001771	Uncharacterized protein; Belongs to the GST superfamily.	Late cornified envelope 2D.	0.599
GSTM1	MAGEA11	ENSPPAP00000021994	ENSPPAP00000013109	Uncharacterized protein; Belongs to the GST superfamily.	MAGE family member A11.	0.764
LCE1A	LCE2C	ENSPPAP00000002586	ENSPPAP00000004662	Late cornified envelope 1A.	Late cornified envelope 2C.	0.983
LCE1A	LCE2D	ENSPPAP00000002586	ENSPPAP00000001771	Late cornified envelope 1A.	Late cornified envelope 2D.	0.991
LCE1A	LCE3C	ENSPPAP00000002586	ENSPPAP00000003179	Late cornified envelope 1A.	Late cornified envelope 3C.	0.812
LCE1A	LCE3D	ENSPPAP00000002586	ENSPPAP00000004563	Late cornified envelope 1A.	Late cornified envelope 3D.	0.548
LCE1A	LCE3E	ENSPPAP00000002586	ENSPPAP00000006187	Late cornified envelope 1A.	Late cornified envelope 3E.	0.630
LCE1A	LCE6A	ENSPPAP00000002586	ENSPPAP00000003102	Late cornified envelope 1A.	Late cornified envelope 6A.	0.974
LCE1F	LCE2C	ENSPPAP00000000372	ENSPPAP00000004662	Late cornified envelope 1F.	Late cornified envelope 2C.	0.834
LCE1F	LCE2D	ENSPPAP00000000372	ENSPPAP00000001771	Late cornified envelope 1F.	Late cornified envelope 2D.	0.885
LCE1F	LCE3C	ENSPPAP00000000372	ENSPPAP00000003179	Late cornified envelope 1F.	Late cornified envelope 3C.	0.441
LCE1F	LCE6A	ENSPPAP00000000372	ENSPPAP00000003102	Late cornified envelope 1F.	Late cornified envelope 6A.	0.755
LCE2C	LCE1A	ENSPPAP00000004662	ENSPPAP00000002586	Late cornified envelope 2C.	Late cornified envelope 1A.	0.983
LCE2C	LCE1F	ENSPPAP00000004662	ENSPPAP00000000372	Late cornified envelope 2C.	Late cornified envelope 1F.	0.834
LCE2C	LCE2D	ENSPPAP00000004662	ENSPPAP00000001771	Late cornified envelope 2C.	Late cornified envelope 2D.	0.988
LCE2C	LCE3C	ENSPPAP00000004662	ENSPPAP00000003179	Late cornified envelope 2C.	Late cornified envelope 3C.	0.659