Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LINGO1Leucine rich repeat and Ig domain containing 1. (620 aa)    
Predicted Functional Partners:
NGFR
Nerve growth factor receptor.
    
 0.969
OMG
Oligodendrocyte myelin glycoprotein.
   
 0.926
RTN4
Reticulon.
   
 0.886
RTN4R
Reticulon 4 receptor.
   
 
 0.795
LINGO2
Leucine rich repeat and Ig domain containing 2.
   
   0.777
MAG
Myelin associated glycoprotein.
   
 0.749
RTN2
Reticulon.
   
 0.718
SV2B
Synaptic vesicle glycoprotein 2B.
   
  
 0.715
ABI2
Abl interactor 2.
     
 0.713
ITPKA
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.707
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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