STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE5Copine 5. (582 aa)    
Predicted Functional Partners:
SLITRK5
SLIT and NTRK like family member 5.
   
 
 0.779
FRMPD1
FERM and PDZ domain containing 1.
   
  
 0.765
TMEM51
Transmembrane protein 51.
      
 0.762
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.761
NCALD
Neurocalcin delta.
   
  
 0.746
SLC2A13
Solute carrier family 2 member 13; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.742
SUB1
SUB1 regulator of transcription.
      
 0.713
RAB28
RAB28, member RAS oncogene family.
     
 0.712
MCTP2
Multiple C2 and transmembrane domain containing 2.
      
 0.691
LMX1A
LIM homeobox transcription factor 1 alpha.
      
 0.670
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.