STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCMTD1Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1. (357 aa)    
Predicted Functional Partners:
WDYHV1
WDYHV motif containing 1.
      
 0.676
TCAF1
TRPM8 channel associated factor 1.
      
 0.584
STK31
Serine/threonine kinase 31.
      
 0.559
FAM102A
Family with sequence similarity 102 member A.
      
 0.463
COL11A1
Collagen type XI alpha 1 chain.
      
 0.461
DPM2
Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.
      
 0.454
EPDR1
Uncharacterized protein.
      
 0.453
ST18
ST18 C2H2C-type zinc finger transcription factor.
   
  
 0.441
PUS7
Pseudouridine synthase 7.
     
 0.403
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.