Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRP11LDL receptor related protein 11. (500 aa)    
Predicted Functional Partners:
LRP12
LDL receptor related protein 12.
      
 0.675
ARRDC4
Arrestin domain containing 4.
      
 0.556
MYADM
Myeloid associated differentiation marker.
      
 0.554
CHAF1A
Chromatin assembly factor 1 subunit A.
      
 0.548
ACOT13
Acyl-CoA thioesterase 13.
      
 0.542
MAN2B2
Alpha-mannosidase.
      
 0.535
GSTM4
Uncharacterized protein; Belongs to the GST superfamily.
      
 0.534
ELP2
Elongator acetyltransferase complex subunit 2.
      
 0.489
DDX25
DEAD-box helicase 25.
      
 0.488
PHYH
Phytanoyl-CoA 2-hydroxylase.
      
 0.485
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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