STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFSD8Major facilitator superfamily domain containing 8. (521 aa)    
Predicted Functional Partners:
CLN8
CLN8 transmembrane ER and ERGIC protein.
      
 0.757
CLN6
CLN6 transmembrane ER protein.
      
 0.730
CLN5
CLN5 intracellular trafficking protein.
      
 0.719
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.690
MPL
MPL proto-oncogene, thrombopoietin receptor.
    
 0.606
KCTD7
Potassium channel tetramerization domain containing 7.
      
 0.570
DNAJC5
DnaJ heat shock protein family (Hsp40) member C5.
      
 0.554
ENSPPAP00000020911
J domain-containing protein.
      
 0.554
TPP1
Tripeptidyl peptidase 1.
      
 0.536
CTSF
Cathepsin F; Belongs to the peptidase C1 family.
      
 0.502
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.