STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM29Tripartite motif containing 29. (588 aa)    
Predicted Functional Partners:
CACTIN
Cactin, spliceosome C complex subunit.
    
 
 0.637
TRIM11
Tripartite motif containing 11.
    
 
 0.600
TRIM9
Tripartite motif containing 9.
   
 0.593
PKP1
Plakophilin 1.
   
 
 0.501
TRIM4
Tripartite motif containing 4.
    
 0.498
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 
 0.485
TRIM31
Tripartite motif containing 31.
    
 
 0.485
KRT5
Keratin 5; Belongs to the intermediate filament family.
   
 0.473
DSG3
Desmoglein 3; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
  
 0.472
FAT2
FAT atypical cadherin 2.
   
 
 0.468
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.