STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF654Zinc finger protein 654. (1128 aa)    
Predicted Functional Partners:
COL6A3
Uncharacterized protein.
    
 0.879
DDX58
DExD/H-box helicase 58.
    
 
 0.831
POLD3
Uncharacterized protein.
   
 0.790
SIRPB1
Uncharacterized protein.
     
 0.765
DDX55
RNA helicase.
   
 
 0.594
DDX31
RNA helicase.
   
 
 0.594
DDX18
RNA helicase.
   
 
 0.564
C3orf38
Chromosome 3 open reading frame 38.
 
    
 0.551
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 
  0.490
DDX10
RNA helicase.
   
 
 0.446
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.