STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL20A1Collagen type XX alpha 1 chain. (1297 aa)    
Predicted Functional Partners:
SLC35C2
Solute carrier family 35 member C2.
 
   
  0.701
SERPINH1
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.559
CLUAP1
Clusterin associated protein 1.
    
 
 0.552
ARSJ
Arylsulfatase family member J.
      
 0.550
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.544
UBE2H
Ubiquitin conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.521
KLHL31
Kelch like family member 31.
      
 0.518
MKNK1
MAPK interacting serine/threonine kinase 1; Belongs to the protein kinase superfamily.
      
 0.516
P4HB
Protein disulfide-isomerase.
    
 0.506
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.503
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.