STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD7BOTU deubiquitinase 7B. (841 aa)    
Predicted Functional Partners:
KXD1
Ubiquitin-like domain-containing protein.
    
  0.909
WIPI1
WD repeat domain, phosphoinositide interacting 1.
      
 0.766
LOC100990877
Ubiquitin-like domain-containing protein.
   
  0.746
RPS27A
Ribosomal protein S27a.
   
  0.746
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.703
PARK7
Parkinsonism associated deglycase.
    
 
 0.701
UBC
Uncharacterized protein.
   
  0.688
UBXN7
UBX domain protein 7.
   
 
 0.688
WIPI2
WD repeat domain, phosphoinositide interacting 2.
      
 0.681
WDR45B
Uncharacterized protein.
      
 0.676
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.