STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGXB4HMG-box containing 4. (600 aa)    
Predicted Functional Partners:
C17orf49
Chromosome 17 open reading frame 49.
    
 0.802
BRD7
Bromodomain containing 7.
   
  
 0.740
CCDC30
Coiled-coil domain containing 30.
      
 0.739
TOM1
Target of myb1 membrane trafficking protein; Belongs to the TOM1 family.
      
 0.701
WDR64
WD repeat domain 64.
      
 0.682
FGFRL1
Fibroblast growth factor receptor like 1.
   
  
 0.681
MCM5
DNA helicase; Belongs to the MCM family.
      
 0.680
BPTF
Bromodomain PHD finger transcription factor.
    
  0.676
CCAR1
Cell division cycle and apoptosis regulator 1.
      
 0.675
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.587
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.