TRIM42 protein (Pan paniscus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TRIM42

Tripartite motif containing 42. (723 aa)

Predicted Functional Partners:

C10orf120

0.424

TRIM23

0.409

TRIM69

0.408

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C10orf120	TRIM42	ENSPPAP00000007809	ENSPPAP00000010013	Chromosome 10 open reading frame 120.	Tripartite motif containing 42.	0.424
TRIM23	TRIM42	ENSPPAP00000008544	ENSPPAP00000010013	Tripartite motif containing 23.	Tripartite motif containing 42.	0.409
TRIM42	C10orf120	ENSPPAP00000010013	ENSPPAP00000007809	Tripartite motif containing 42.	Chromosome 10 open reading frame 120.	0.424
TRIM42	TRIM23	ENSPPAP00000010013	ENSPPAP00000008544	Tripartite motif containing 42.	Tripartite motif containing 23.	0.409
TRIM42	TRIM69	ENSPPAP00000010013	ENSPPAP00000036731	Tripartite motif containing 42.	Tripartite motif containing 69.	0.408
TRIM69	TRIM42	ENSPPAP00000036731	ENSPPAP00000010013	Tripartite motif containing 69.	Tripartite motif containing 42.	0.408