STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPGS2SMI1_KNR4 domain-containing protein. (300 aa)    
Predicted Functional Partners:
TTLL1
Tubulin tyrosine ligase like 1.
   
 0.970
LRRC49
Leucine rich repeat containing 49.
    
 0.959
NICN1
Uncharacterized protein.
    
 0.956
LOC100981482
Uncharacterized protein.
    
 0.657
TTL
Tubulin tyrosine ligase.
   
 0.599
C11orf49
Chromosome 11 open reading frame 49.
    
   0.573
KIAA1328
KIAA1328.
      
 0.459
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.