STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICAL3Microtubule associated monooxygenase, calponin and LIM domain containing 3. (1960 aa)    
Predicted Functional Partners:
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.824
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
   
 
 0.673
NINL
Ninein like.
    
 
 0.646
KIF23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.615
ERC1
ELKS/RAB6-interacting/CAST family member 1.
    
 
 0.548
RAB13
Uncharacterized protein.
   
 
 0.536
RAB6A
RAB6A, member RAS oncogene family.
      
 0.532
RAB8B
RAB8B, member RAS oncogene family.
   
 
 0.470
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.468
RAB10
RAB10, member RAS oncogene family.
   
 
 0.462
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.