STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD1Methyl-CpG binding domain protein 1. (655 aa)    
Predicted Functional Partners:
CFAP52
Cilia and flagella associated protein 52.
   
 0.608
CFAP45
Cilia and flagella associated protein 45.
   
 0.567
TEKT2
Tektin 2.
   
 
 0.558
MNS1
Meiosis specific nuclear structural 1.
   
 0.544
CCDC151
Coiled-coil domain containing 151.
   
 0.531
TTC25
Tetratricopeptide repeat domain 25.
   
 0.530
CCDC114
Coiled-coil domain containing 114.
   
 
 0.522
TEKT3
Tektin 3.
   
 
 0.514
EFHC2
EF-hand domain containing 2.
   
 
 0.500
ARMC4
Armadillo repeat containing 4.
   
 
 0.498
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.