STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPPAP00000032966J domain-containing protein. (243 aa)    
Predicted Functional Partners:
SF3A2
Matrin-type domain-containing protein.
    
   0.689
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
   
 
 0.650
SRRT
Serrate, RNA effector molecule.
   
 
  0.643
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 
 0.633
RBM25
RNA binding motif protein 25.
   
 
  0.613
SRRM2
Serine/arginine repetitive matrix 2.
    
 0.604
CCAR1
Cell division cycle and apoptosis regulator 1.
   
 
  0.602
HTATSF1
HIV-1 Tat specific factor 1.
     
 0.597
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
    
  0.591
RBM5
RNA binding motif protein 5.
   
 
  0.589
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.