STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP3Single stranded DNA binding protein 3. (388 aa)    
Predicted Functional Partners:
SSBP2
Single stranded DNA binding protein 2.
  
 
 
0.714
ISL2
ISL LIM homeobox 2.
    
 
 0.700
LMO4
LIM domain only 4.
    
 
 0.683
LHX1
LIM/homeobox protein Lhx1; Potential transcription factor. May play a role in early mesoderm formation and later in lateral mesoderm differentiation and neurogenesis (By similarity).
    
 
 0.677
ISL1
ISL LIM homeobox 1.
    
 
 0.672
LHX9
LHX9 isoform 2.
    
 
 0.663
LMX1B
LIM homeobox transcription factor 1 beta.
    
   0.647
LDB2
LIM domain binding 2.
   
 
 0.614
SSBP4
SSBP4 isoform 11.
  
 
  
0.512
LDB1
LIM domain binding 1.
   
 
 0.510
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.