STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC44A5Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family. (719 aa)    
Predicted Functional Partners:
PPT1
Palmitoyl-protein thioesterase 1.
   
  
 0.946
C8A
C8A isoform 1.
   
  
 0.833
SGCD
Sarcoglycan, delta (35kDa dystrophin-associated glycoprotein).
      
 0.825
ABCC2
ATP binding cassette subfamily C member 2.
   
  
 0.819
LHFPL3
LHFPL tetraspan subfamily member 3.
      
 0.785
DEFB107A
Beta-defensin 107A; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.634
CD48
CD48 isoform 2.
      
 0.623
CLBA1
Clathrin binding box of aftiphilin containing 1.
   
    0.522
TTC6
TTC6 isoform 3.
   
    0.522
SSBP1-2
Single stranded DNA binding protein 1.
      
 0.453
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.