RAB13 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHBP1L1	RAB13	ENSPTRP00000006698	ENSPTRP00000002305	EH domain binding protein 1 like 1.	RAB13, member RAS oncogene family.	0.742
EHBP1L1	RAB8A	ENSPTRP00000006698	ENSPTRP00000018163	EH domain binding protein 1 like 1.	RAB8A, member RAS oncogene family.	0.715
EHBP1L1	RAB8B	ENSPTRP00000006698	ENSPTRP00000061884	EH domain binding protein 1 like 1.	RAB8B, member RAS oncogene family.	0.633
GDI1	RAB13	ENSPTRP00000047203	ENSPTRP00000002305	Rab GDP dissociation inhibitor alpha; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. Promotes the dissociation of GDP-bound Rab proteins from the membrane and inhibits their activation. Promotes the dissociation of RAB1A, RAB3A, RAB5A and RAB10 from membranes (By similarity).	RAB13, member RAS oncogene family.	0.878
GDI1	RAB8A	ENSPTRP00000047203	ENSPTRP00000018163	Rab GDP dissociation inhibitor alpha; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. Promotes the dissociation of GDP-bound Rab proteins from the membrane and inhibits their activation. Promotes the dissociation of RAB1A, RAB3A, RAB5A and RAB10 from membranes (By similarity).	RAB8A, member RAS oncogene family.	0.948
GDI1	RAB8B	ENSPTRP00000047203	ENSPTRP00000061884	Rab GDP dissociation inhibitor alpha; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. Promotes the dissociation of GDP-bound Rab proteins from the membrane and inhibits their activation. Promotes the dissociation of RAB1A, RAB3A, RAB5A and RAB10 from membranes (By similarity).	RAB8B, member RAS oncogene family.	0.876
MICALL2	RAB13	ENSPTRP00000088665	ENSPTRP00000002305	MICALL2 isoform 11.	RAB13, member RAS oncogene family.	0.965
MICALL2	RAB8A	ENSPTRP00000088665	ENSPTRP00000018163	MICALL2 isoform 11.	RAB8A, member RAS oncogene family.	0.979
MICALL2	RAB8B	ENSPTRP00000088665	ENSPTRP00000061884	MICALL2 isoform 11.	RAB8B, member RAS oncogene family.	0.962
PRKACB	PRKACG	ENSPTRP00000042330	ENSPTRP00000035898	Protein kinase cAMP-activated catalytic subunit beta; Belongs to the protein kinase superfamily.	Protein kinase cAMP-activated catalytic subunit gamma; Belongs to the protein kinase superfamily.	0.997
PRKACB	RAB13	ENSPTRP00000042330	ENSPTRP00000002305	Protein kinase cAMP-activated catalytic subunit beta; Belongs to the protein kinase superfamily.	RAB13, member RAS oncogene family.	0.925
PRKACG	PRKACB	ENSPTRP00000035898	ENSPTRP00000042330	Protein kinase cAMP-activated catalytic subunit gamma; Belongs to the protein kinase superfamily.	Protein kinase cAMP-activated catalytic subunit beta; Belongs to the protein kinase superfamily.	0.997
PRKACG	RAB13	ENSPTRP00000035898	ENSPTRP00000002305	Protein kinase cAMP-activated catalytic subunit gamma; Belongs to the protein kinase superfamily.	RAB13, member RAS oncogene family.	0.925
RAB13	EHBP1L1	ENSPTRP00000002305	ENSPTRP00000006698	RAB13, member RAS oncogene family.	EH domain binding protein 1 like 1.	0.742
RAB13	GDI1	ENSPTRP00000002305	ENSPTRP00000047203	RAB13, member RAS oncogene family.	Rab GDP dissociation inhibitor alpha; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. Promotes the dissociation of GDP-bound Rab proteins from the membrane and inhibits their activation. Promotes the dissociation of RAB1A, RAB3A, RAB5A and RAB10 from membranes (By similarity).	0.878
RAB13	MICALL2	ENSPTRP00000002305	ENSPTRP00000088665	RAB13, member RAS oncogene family.	MICALL2 isoform 11.	0.965
RAB13	PRKACB	ENSPTRP00000002305	ENSPTRP00000042330	RAB13, member RAS oncogene family.	Protein kinase cAMP-activated catalytic subunit beta; Belongs to the protein kinase superfamily.	0.925
RAB13	PRKACG	ENSPTRP00000002305	ENSPTRP00000035898	RAB13, member RAS oncogene family.	Protein kinase cAMP-activated catalytic subunit gamma; Belongs to the protein kinase superfamily.	0.925
RAB13	RAB8A	ENSPTRP00000002305	ENSPTRP00000018163	RAB13, member RAS oncogene family.	RAB8A, member RAS oncogene family.	0.775
RAB13	RAB8B	ENSPTRP00000002305	ENSPTRP00000061884	RAB13, member RAS oncogene family.	RAB8B, member RAS oncogene family.	0.863