CK820_G0053542 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CK820_G0053542	DYNC1H1	ENSPTRP00000003766	ENSPTRP00000079030	TUBB8 isoform 7.	Dynein, cytoplasmic 1, heavy chain 1.	0.596
CK820_G0053542	ENSPTRP00000008373	ENSPTRP00000003766	ENSPTRP00000008373	TUBB8 isoform 7.	annotation not available	0.610
CK820_G0053542	ENSPTRP00000063748	ENSPTRP00000003766	ENSPTRP00000063748	TUBB8 isoform 7.	annotation not available	0.610
CK820_G0053542	LOC107973630	ENSPTRP00000003766	ENSPTRP00000021312	TUBB8 isoform 7.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.610
CK820_G0053542	TUBA1A	ENSPTRP00000003766	ENSPTRP00000008374	TUBB8 isoform 7.	Detyrosinated tubulin alpha-1A chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).	0.711
CK820_G0053542	TUBA1B	ENSPTRP00000003766	ENSPTRP00000065915	TUBB8 isoform 7.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.651
CK820_G0053542	TUBA1C	ENSPTRP00000003766	ENSPTRP00000071873	TUBB8 isoform 7.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.676
CK820_G0053542	TUBA3C	ENSPTRP00000003766	ENSPTRP00000039096	TUBB8 isoform 7.	Tubulin alpha 3c.	0.610
CK820_G0053542	TUBA3E	ENSPTRP00000003766	ENSPTRP00000062663	TUBB8 isoform 7.	Tubulin, alpha 3e.	0.610
CK820_G0053542	TUBA4A	ENSPTRP00000003766	ENSPTRP00000022120	TUBB8 isoform 7.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.726
DYNC1H1	CK820_G0053542	ENSPTRP00000079030	ENSPTRP00000003766	Dynein, cytoplasmic 1, heavy chain 1.	TUBB8 isoform 7.	0.596
DYNC1H1	ENSPTRP00000063748	ENSPTRP00000079030	ENSPTRP00000063748	Dynein, cytoplasmic 1, heavy chain 1.	annotation not available	0.731
DYNC1H1	LOC107973630	ENSPTRP00000079030	ENSPTRP00000021312	Dynein, cytoplasmic 1, heavy chain 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.731
DYNC1H1	TUBA1A	ENSPTRP00000079030	ENSPTRP00000008374	Dynein, cytoplasmic 1, heavy chain 1.	Detyrosinated tubulin alpha-1A chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).	0.825
DYNC1H1	TUBA1B	ENSPTRP00000079030	ENSPTRP00000065915	Dynein, cytoplasmic 1, heavy chain 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.762
DYNC1H1	TUBA1C	ENSPTRP00000079030	ENSPTRP00000071873	Dynein, cytoplasmic 1, heavy chain 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.797
DYNC1H1	TUBA4A	ENSPTRP00000079030	ENSPTRP00000022120	Dynein, cytoplasmic 1, heavy chain 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.757
ENSPTRP00000008373	CK820_G0053542	ENSPTRP00000008373	ENSPTRP00000003766	annotation not available	TUBB8 isoform 7.	0.610
ENSPTRP00000008373	TUBA1A	ENSPTRP00000008373	ENSPTRP00000008374	annotation not available	Detyrosinated tubulin alpha-1A chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).	0.735
ENSPTRP00000008373	TUBA1B	ENSPTRP00000008373	ENSPTRP00000065915	annotation not available	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.663