STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DRGXDorsal root ganglia homeobox. (263 aa)    
Predicted Functional Partners:
ZMAT1
Zinc finger matrin-type 1.
   
  
 0.874
RGMA
Repulsive guidance molecule BMP co-receptor a.
      
 0.671
ERCC6
ERCC6 isoform 1.
    
 
 0.475
ENSPTRP00000079019
annotation not available
      
 0.449
HJV
HFE2 isoform 1.
      
 0.449
POU4F1
POU domain protein.
   
 
 0.441
LDB1
LIM domain binding 1.
    
 0.404
LDB2
LIM domain binding 2.
    
 0.404
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.