MYOF protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP4M1	CRYL1	ENSPTRP00000074350	ENSPTRP00000009697	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	Crystallin, lambda 1.	0.751
AP4M1	ECI2	ENSPTRP00000074350	ENSPTRP00000030198	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	Enoyl-CoA delta isomerase 2.	0.735
AP4M1	MYOF	ENSPTRP00000074350	ENSPTRP00000004825	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	MYOF isoform 3.	0.755
AP4M1	OTUD7B	ENSPTRP00000074350	ENSPTRP00000002112	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	OTU domain containing 7B.	0.757
AP4M1	RHNO1	ENSPTRP00000074350	ENSPTRP00000007761	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	RAD9-HUS1-RAD1 interacting nuclear orphan 1.	0.761
AP4M1	TTLL5	ENSPTRP00000074350	ENSPTRP00000011141	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	TTLL5 isoform 7.	0.761
CHRNA1	HMCN2	ENSPTRP00000021633	ENSPTRP00000036731	Cholinergic receptor, nicotinic, alpha 1 (Muscle).	HMCN2 isoform 1.	0.654
CHRNA1	MYOF	ENSPTRP00000021633	ENSPTRP00000004825	Cholinergic receptor, nicotinic, alpha 1 (Muscle).	MYOF isoform 3.	0.719
CHRNA1	PITRM1	ENSPTRP00000021633	ENSPTRP00000042799	Cholinergic receptor, nicotinic, alpha 1 (Muscle).	Pitrilysin metallopeptidase 1.	0.401
CRYL1	AP4M1	ENSPTRP00000009697	ENSPTRP00000074350	Crystallin, lambda 1.	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	0.751
CRYL1	ECI2	ENSPTRP00000009697	ENSPTRP00000030198	Crystallin, lambda 1.	Enoyl-CoA delta isomerase 2.	0.886
CRYL1	MYOF	ENSPTRP00000009697	ENSPTRP00000004825	Crystallin, lambda 1.	MYOF isoform 3.	0.729
CRYL1	OTUD7B	ENSPTRP00000009697	ENSPTRP00000002112	Crystallin, lambda 1.	OTU domain containing 7B.	0.737
CRYL1	RHNO1	ENSPTRP00000009697	ENSPTRP00000007761	Crystallin, lambda 1.	RAD9-HUS1-RAD1 interacting nuclear orphan 1.	0.751
CRYL1	TTLL5	ENSPTRP00000009697	ENSPTRP00000011141	Crystallin, lambda 1.	TTLL5 isoform 7.	0.751
ECI2	AP4M1	ENSPTRP00000030198	ENSPTRP00000074350	Enoyl-CoA delta isomerase 2.	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	0.735
ECI2	CRYL1	ENSPTRP00000030198	ENSPTRP00000009697	Enoyl-CoA delta isomerase 2.	Crystallin, lambda 1.	0.886
ECI2	MYOF	ENSPTRP00000030198	ENSPTRP00000004825	Enoyl-CoA delta isomerase 2.	MYOF isoform 3.	0.725
ECI2	OTUD7B	ENSPTRP00000030198	ENSPTRP00000002112	Enoyl-CoA delta isomerase 2.	OTU domain containing 7B.	0.789
ECI2	RHNO1	ENSPTRP00000030198	ENSPTRP00000007761	Enoyl-CoA delta isomerase 2.	RAD9-HUS1-RAD1 interacting nuclear orphan 1.	0.735