STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSCL2Berardinelli-Seip congenital lipodystrophy 2 (Seipin). (464 aa)    
Predicted Functional Partners:
AGPAT2
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
      
 0.806
TMEM19
Transmembrane protein 19.
    
   0.779
ASCL3
Achaete-scute family bHLH transcription factor 3.
      
 0.760
SMIM3
Small integral membrane protein 3.
    
   0.701
CAVIN1
Caveolae associated protein 1.
      
 0.669
ACSL3
Acyl-CoA synthetase long-chain family member 3.
      
 0.655
TMEM159
Transmembrane protein 159.
      
 0.654
NTRK1
Tyrosine-protein kinase receptor.
      
 0.648
GPAT4
1-acylglycerol-3-phosphate O-acyltransferase 6 (Lysophosphatidic acid acyltransferase, zeta).
      
 0.645
LMNA
LMNA isoform 8; Belongs to the intermediate filament family.
      
 0.629
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.