STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM4RNA-binding protein 14. (669 aa)    
Predicted Functional Partners:
SFPQ
Splicing factor proline/glutamine-rich.
   
 
 0.919
NONO
non-POU domain containing octamer binding.
   
 
 0.911
PSPC1
Paraspeckle component 1.
   
 
 0.853
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 
 0.834
PTBP1
PTBP1 isoform 2.
   
 
 0.819
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.806
PCBP4
Poly(rC) binding protein 4.
   
 
 0.777
MATR3
MATR3 isoform 14.
   
 
 0.766
LOC454204
Non-POU domain-containing octamer-binding protein.
   
 
 0.756
ALYREF
Aly/REF export factor.
   
  
 0.743
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.