STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGHMBP2Immunoglobulin mu DNA binding protein 2. (997 aa)    
Predicted Functional Partners:
GARS1
GARS isoform 2.
      
 0.741
NELFE
Negative elongation factor complex member E.
    
   0.725
ABT1
Activator of basal transcription 1.
    
 
 0.677
GTF3C1
General transcription factor IIIC, polypeptide 1, alpha 220kDa.
    
 
 0.595
LOC461829
Survival of motor neuron 1, telomeric.
      
 0.592
NELFA
Negative elongation factor complex member A.
   
   0.565
TUT1
Terminal uridylyl transferase 1, U6 snRNA-specific.
   
    0.558
SETX
SETX isoform 1.
      
0.550
MN1
MN1 proto-oncogene, transcriptional regulator.
      
 0.493
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.487
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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