STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP42Rho GTPase activating protein 42. (874 aa)    
Predicted Functional Partners:
KRTAP20-4
Keratin associated protein 20-4.
      
 0.833
GFOD1
Glucose-fructose oxidoreductase domain containing 1.
      
 0.833
PHOX2A
Paired like homeobox 2A.
      
 0.513
RHOA
Ras homolog family member A.
    
 0.477
E2F2
E2F transcription factor 2.
      
 0.435
PHOX2B
Paired like homeobox 2B.
      
 0.420
SRF
Serum response factor (C-fos serum response element-binding transcription factor).
      
 0.414
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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