MMP3 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOE	MMP10	ENSPTRP00000054411	ENSPTRP00000007259	Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...]	Matrix metallopeptidase 10.	0.637
APOE	MMP3	ENSPTRP00000054411	ENSPTRP00000007260	Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...]	Matrix metallopeptidase 3 (Stromelysin 1, progelatinase).	0.825
APOE	MMP9	ENSPTRP00000054411	ENSPTRP00000023334	Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...]	Matrix metallopeptidase 9.	0.703
ENSPTRP00000088770	MMP1	ENSPTRP00000088770	ENSPTRP00000007262	annotation not available	Matrix metallopeptidase 1 (Interstitial collagenase).	0.862
ENSPTRP00000088770	MMP10	ENSPTRP00000088770	ENSPTRP00000007259	annotation not available	Matrix metallopeptidase 10.	0.827
ENSPTRP00000088770	MMP3	ENSPTRP00000088770	ENSPTRP00000007260	annotation not available	Matrix metallopeptidase 3 (Stromelysin 1, progelatinase).	0.865
ENSPTRP00000088770	MMP7	ENSPTRP00000088770	ENSPTRP00000007254	annotation not available	Matrix metallopeptidase 7.	0.660
ENSPTRP00000088770	MMP9	ENSPTRP00000088770	ENSPTRP00000023334	annotation not available	Matrix metallopeptidase 9.	0.963
ENSPTRP00000088770	TIMP2	ENSPTRP00000088770	ENSPTRP00000061107	annotation not available	CEP295NL isoform 1.	0.536
MMP1	ENSPTRP00000088770	ENSPTRP00000007262	ENSPTRP00000088770	Matrix metallopeptidase 1 (Interstitial collagenase).	annotation not available	0.862
MMP1	MMP10	ENSPTRP00000007262	ENSPTRP00000007259	Matrix metallopeptidase 1 (Interstitial collagenase).	Matrix metallopeptidase 10.	0.789
MMP1	MMP3	ENSPTRP00000007262	ENSPTRP00000007260	Matrix metallopeptidase 1 (Interstitial collagenase).	Matrix metallopeptidase 3 (Stromelysin 1, progelatinase).	0.988
MMP1	MMP7	ENSPTRP00000007262	ENSPTRP00000007254	Matrix metallopeptidase 1 (Interstitial collagenase).	Matrix metallopeptidase 7.	0.626
MMP1	MMP9	ENSPTRP00000007262	ENSPTRP00000023334	Matrix metallopeptidase 1 (Interstitial collagenase).	Matrix metallopeptidase 9.	0.970
MMP1	NFKB1	ENSPTRP00000007262	ENSPTRP00000028033	Matrix metallopeptidase 1 (Interstitial collagenase).	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.	0.933
MMP1	RELA	ENSPTRP00000007262	ENSPTRP00000054405	Matrix metallopeptidase 1 (Interstitial collagenase).	V-rel reticuloendotheliosis viral oncogene homolog A (Avian).	0.920
MMP1	TIMP1	ENSPTRP00000007262	ENSPTRP00000081474	Matrix metallopeptidase 1 (Interstitial collagenase).	TIMP metallopeptidase inhibitor 1.	0.902
MMP1	TIMP2	ENSPTRP00000007262	ENSPTRP00000061107	Matrix metallopeptidase 1 (Interstitial collagenase).	CEP295NL isoform 1.	0.831
MMP10	APOE	ENSPTRP00000007259	ENSPTRP00000054411	Matrix metallopeptidase 10.	Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...]	0.637
MMP10	ENSPTRP00000088770	ENSPTRP00000007259	ENSPTRP00000088770	Matrix metallopeptidase 10.	annotation not available	0.827