TECTA protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CK820_G0040666	TECTA	ENSPTRP00000093662	ENSPTRP00000007526	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Tubulin folding cofactor E-like.	0.510
DHX35	TECTA	ENSPTRP00000052160	ENSPTRP00000007526	DEAH (Asp-Glu-Ala-His) box polypeptide 35.	Tubulin folding cofactor E-like.	0.636
DHX35	TSPAN17	ENSPTRP00000052160	ENSPTRP00000030004	DEAH (Asp-Glu-Ala-His) box polypeptide 35.	Tetraspanin.	0.556
DUS3L	PSMG4	ENSPTRP00000017602	ENSPTRP00000091629	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1.	Proteasome assembly chaperone 4.	0.552
DUS3L	TECTA	ENSPTRP00000017602	ENSPTRP00000007526	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1.	Tubulin folding cofactor E-like.	0.517
PSMG4	DUS3L	ENSPTRP00000091629	ENSPTRP00000017602	Proteasome assembly chaperone 4.	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1.	0.552
PSMG4	TECTA	ENSPTRP00000091629	ENSPTRP00000007526	Proteasome assembly chaperone 4.	Tubulin folding cofactor E-like.	0.498
TBCB	TBCC	ENSPTRP00000018649	ENSPTRP00000031050	Tubulin folding cofactor B.	Tubulin folding cofactor C.	0.615
TBCB	TBCD	ENSPTRP00000018649	ENSPTRP00000086064	Tubulin folding cofactor B.	TBCD isoform 2.	0.894
TBCB	TECTA	ENSPTRP00000018649	ENSPTRP00000007526	Tubulin folding cofactor B.	Tubulin folding cofactor E-like.	0.676
TBCC	TBCB	ENSPTRP00000031050	ENSPTRP00000018649	Tubulin folding cofactor C.	Tubulin folding cofactor B.	0.615
TBCC	TBCD	ENSPTRP00000031050	ENSPTRP00000086064	Tubulin folding cofactor C.	TBCD isoform 2.	0.940
TBCC	TECTA	ENSPTRP00000031050	ENSPTRP00000007526	Tubulin folding cofactor C.	Tubulin folding cofactor E-like.	0.697
TBCD	TBCB	ENSPTRP00000086064	ENSPTRP00000018649	TBCD isoform 2.	Tubulin folding cofactor B.	0.894
TBCD	TBCC	ENSPTRP00000086064	ENSPTRP00000031050	TBCD isoform 2.	Tubulin folding cofactor C.	0.940
TBCD	TECTA	ENSPTRP00000086064	ENSPTRP00000007526	TBCD isoform 2.	Tubulin folding cofactor E-like.	0.595
TECTA	CK820_G0040666	ENSPTRP00000007526	ENSPTRP00000093662	Tubulin folding cofactor E-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.510
TECTA	DHX35	ENSPTRP00000007526	ENSPTRP00000052160	Tubulin folding cofactor E-like.	DEAH (Asp-Glu-Ala-His) box polypeptide 35.	0.636
TECTA	DUS3L	ENSPTRP00000007526	ENSPTRP00000017602	Tubulin folding cofactor E-like.	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1.	0.517
TECTA	PSMG4	ENSPTRP00000007526	ENSPTRP00000091629	Tubulin folding cofactor E-like.	Proteasome assembly chaperone 4.	0.498