STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC12HOXC12 isoform 1. (280 aa)    
Predicted Functional Partners:
KCNQ1
Potassium voltage-gated channel subfamily Q member 1; Belongs to the potassium channel family.
      
 0.680
SLIRP
SRA stem-loop interacting RNA binding protein.
      
 0.631
IGF2R
IGF2R isoform 2.
      
 0.599
KRT32
KRT32 isoform 1; Belongs to the intermediate filament family.
      
 0.572
KRT35
KRT35 isoform 1; Belongs to the intermediate filament family.
      
 0.572
HOXC5
HOXC5 isoform 1.
    
 
0.470
HOXC11
HOXC11 isoform 1.
  
  
0.432
STAU1
Staufen, RNA binding protein, homolog 1.
      
 0.425
FOXN1
FOXN1 isoform 2.
    
 
 0.411
ISL1
ISL LIM homeobox 1.
   
 
 0.408
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.