STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN8Tetraspanin. (237 aa)    
Predicted Functional Partners:
ITGA4
Integrin, alpha 4 (Antigen CD49D, alpha 4 subunit of VLA-4 receptor); Belongs to the integrin alpha chain family.
   
 0.818
HHEX
Hematopoietically expressed homeobox.
      
 0.728
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 0.715
CLDN7
Claudin-7.
   
  
 0.697
SCGB1D2
Secretoglobin family 1D member 2.
      
 0.691
IGF2BP2
Insulin like growth factor 2 mRNA binding protein 2.
      
 0.686
MS4A12
Membrane spanning 4-domains A12.
      
 0.684
CDKAL1
CDK5 regulatory subunit-associated protein 1-like 1.
      
 0.677
MUC13
Mucin 13, cell surface associated.
   
 
 0.668
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.660
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.