RAB21 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHM	ENSPTRP00000078517	ENSPTRP00000037969	ENSPTRP00000078517	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	annotation not available	0.680
CHM	ENSPTRP00000079183	ENSPTRP00000037969	ENSPTRP00000079183	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	annotation not available	0.680
CHM	ENSPTRP00000088204	ENSPTRP00000037969	ENSPTRP00000088204	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	annotation not available	0.680
CHM	RAB21	ENSPTRP00000037969	ENSPTRP00000090961	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	RAB21, member RAS oncogene family.	0.836
CHM	RAB22A	ENSPTRP00000037969	ENSPTRP00000092289	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	RAB22A, member RAS oncogene family.	0.689
CHM	RABGEF1	ENSPTRP00000037969	ENSPTRP00000047947	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	Rab5 GDP/GTP exchange factor isoform X3.	0.680
ENSPTRP00000078517	CHM	ENSPTRP00000078517	ENSPTRP00000037969	annotation not available	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.680
ENSPTRP00000078517	ENSPTRP00000079183	ENSPTRP00000078517	ENSPTRP00000079183	annotation not available	annotation not available	0.429
ENSPTRP00000078517	ENSPTRP00000088204	ENSPTRP00000078517	ENSPTRP00000088204	annotation not available	annotation not available	0.429
ENSPTRP00000078517	RAB21	ENSPTRP00000078517	ENSPTRP00000090961	annotation not available	RAB21, member RAS oncogene family.	0.781
ENSPTRP00000078517	RAB22A	ENSPTRP00000078517	ENSPTRP00000092289	annotation not available	RAB22A, member RAS oncogene family.	0.811
ENSPTRP00000078517	RABGEF1	ENSPTRP00000078517	ENSPTRP00000047947	annotation not available	Rab5 GDP/GTP exchange factor isoform X3.	0.429
ENSPTRP00000079183	CHM	ENSPTRP00000079183	ENSPTRP00000037969	annotation not available	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.680
ENSPTRP00000079183	ENSPTRP00000078517	ENSPTRP00000079183	ENSPTRP00000078517	annotation not available	annotation not available	0.429
ENSPTRP00000079183	ENSPTRP00000088204	ENSPTRP00000079183	ENSPTRP00000088204	annotation not available	annotation not available	0.429
ENSPTRP00000079183	RAB21	ENSPTRP00000079183	ENSPTRP00000090961	annotation not available	RAB21, member RAS oncogene family.	0.781
ENSPTRP00000079183	RAB22A	ENSPTRP00000079183	ENSPTRP00000092289	annotation not available	RAB22A, member RAS oncogene family.	0.811
ENSPTRP00000079183	RABGEF1	ENSPTRP00000079183	ENSPTRP00000047947	annotation not available	Rab5 GDP/GTP exchange factor isoform X3.	0.429
ENSPTRP00000088204	CHM	ENSPTRP00000088204	ENSPTRP00000037969	annotation not available	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.680
ENSPTRP00000088204	ENSPTRP00000078517	ENSPTRP00000088204	ENSPTRP00000078517	annotation not available	annotation not available	0.429