Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASP2 | CASP9 | ENSPTRP00000033919 | ENSPTRP00000089496 | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | CASP9 isoform 4; Belongs to the peptidase C14A family. | 0.605 |
CASP2 | CRADD | ENSPTRP00000033919 | ENSPTRP00000087931 | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | CASP2 and RIPK1 domain containing adaptor with death domain. | 0.947 |
CASP2 | FADD | ENSPTRP00000033919 | ENSPTRP00000006883 | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | FAS-associated death domain protein; Apoptotic adaptor molecule that recruits caspase-8 or caspase-10 to the activated Fas (CD95) or TNFR-1 receptors. The resulting aggregate called the death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation. Active caspase-8 initiates the subsequent cascade of caspases mediating apoptosis. Involved in interferon-mediated antiviral immune response, playing a role in the positive regulation of interferon signaling. | 0.631 |
CASP2 | PIDD1 | ENSPTRP00000033919 | ENSPTRP00000082395 | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | Leucine-rich repeats and death domain containing. | 0.973 |
CASP2 | RIPK1 | ENSPTRP00000033919 | ENSPTRP00000030180 | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | Receptor (TNFRSF)-interacting serine-threonine kinase 1. | 0.549 |
CASP2 | TRADD | ENSPTRP00000033919 | ENSPTRP00000046129 | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | TNFRSF1A-associated via death domain. | 0.664 |
CASP2-2 | CASP9 | ENSPTRP00000071930 | ENSPTRP00000089496 | Caspase 2. | CASP9 isoform 4; Belongs to the peptidase C14A family. | 0.605 |
CASP2-2 | CRADD | ENSPTRP00000071930 | ENSPTRP00000087931 | Caspase 2. | CASP2 and RIPK1 domain containing adaptor with death domain. | 0.947 |
CASP2-2 | FADD | ENSPTRP00000071930 | ENSPTRP00000006883 | Caspase 2. | FAS-associated death domain protein; Apoptotic adaptor molecule that recruits caspase-8 or caspase-10 to the activated Fas (CD95) or TNFR-1 receptors. The resulting aggregate called the death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation. Active caspase-8 initiates the subsequent cascade of caspases mediating apoptosis. Involved in interferon-mediated antiviral immune response, playing a role in the positive regulation of interferon signaling. | 0.631 |
CASP2-2 | PIDD1 | ENSPTRP00000071930 | ENSPTRP00000082395 | Caspase 2. | Leucine-rich repeats and death domain containing. | 0.873 |
CASP2-2 | RIPK1 | ENSPTRP00000071930 | ENSPTRP00000030180 | Caspase 2. | Receptor (TNFRSF)-interacting serine-threonine kinase 1. | 0.549 |
CASP2-2 | TRADD | ENSPTRP00000071930 | ENSPTRP00000046129 | Caspase 2. | TNFRSF1A-associated via death domain. | 0.664 |
CASP9 | CASP2 | ENSPTRP00000089496 | ENSPTRP00000033919 | CASP9 isoform 4; Belongs to the peptidase C14A family. | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | 0.605 |
CASP9 | CASP2-2 | ENSPTRP00000089496 | ENSPTRP00000071930 | CASP9 isoform 4; Belongs to the peptidase C14A family. | Caspase 2. | 0.605 |
CASP9 | CRADD | ENSPTRP00000089496 | ENSPTRP00000087931 | CASP9 isoform 4; Belongs to the peptidase C14A family. | CASP2 and RIPK1 domain containing adaptor with death domain. | 0.578 |
CASP9 | FADD | ENSPTRP00000089496 | ENSPTRP00000006883 | CASP9 isoform 4; Belongs to the peptidase C14A family. | FAS-associated death domain protein; Apoptotic adaptor molecule that recruits caspase-8 or caspase-10 to the activated Fas (CD95) or TNFR-1 receptors. The resulting aggregate called the death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation. Active caspase-8 initiates the subsequent cascade of caspases mediating apoptosis. Involved in interferon-mediated antiviral immune response, playing a role in the positive regulation of interferon signaling. | 0.798 |
CASP9 | PIDD1 | ENSPTRP00000089496 | ENSPTRP00000082395 | CASP9 isoform 4; Belongs to the peptidase C14A family. | Leucine-rich repeats and death domain containing. | 0.510 |
CASP9 | RIPK1 | ENSPTRP00000089496 | ENSPTRP00000030180 | CASP9 isoform 4; Belongs to the peptidase C14A family. | Receptor (TNFRSF)-interacting serine-threonine kinase 1. | 0.542 |
CASP9 | TRADD | ENSPTRP00000089496 | ENSPTRP00000046129 | CASP9 isoform 4; Belongs to the peptidase C14A family. | TNFRSF1A-associated via death domain. | 0.623 |
CRADD | CASP2 | ENSPTRP00000087931 | ENSPTRP00000033919 | CASP2 and RIPK1 domain containing adaptor with death domain. | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | 0.947 |
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