GCN1 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCF3	DRG2	ENSPTRP00000026982	ENSPTRP00000015076	ATP-binding cassette, sub-family F (GCN20), member 3.	Developmentally regulated GTP binding protein 2.	0.480
ABCF3	EEF2	ENSPTRP00000026982	ENSPTRP00000017487	ATP-binding cassette, sub-family F (GCN20), member 3.	Eukaryotic translation elongation factor 2.	0.675
ABCF3	EIF2AK4	ENSPTRP00000026982	ENSPTRP00000011798	ATP-binding cassette, sub-family F (GCN20), member 3.	Eukaryotic translation initiation factor 2 alpha kinase 4.	0.724
ABCF3	ENSPTRP00000079358	ENSPTRP00000026982	ENSPTRP00000079358	ATP-binding cassette, sub-family F (GCN20), member 3.	annotation not available	0.423
ABCF3	EPRS1	ENSPTRP00000026982	ENSPTRP00000092889	ATP-binding cassette, sub-family F (GCN20), member 3.	EPRS isoform 1.	0.488
ABCF3	GCN1	ENSPTRP00000026982	ENSPTRP00000009376	ATP-binding cassette, sub-family F (GCN20), member 3.	GCN1 general control of amino-acid synthesis 1-like 1.	0.877
ABCF3	HEATR1	ENSPTRP00000026982	ENSPTRP00000003615	ATP-binding cassette, sub-family F (GCN20), member 3.	HEAT repeat containing 1.	0.570
ABCF3	RWDD1	ENSPTRP00000026982	ENSPTRP00000031647	ATP-binding cassette, sub-family F (GCN20), member 3.	RWD domain containing 1.	0.423
DRG2	ABCF3	ENSPTRP00000015076	ENSPTRP00000026982	Developmentally regulated GTP binding protein 2.	ATP-binding cassette, sub-family F (GCN20), member 3.	0.480
DRG2	ENSPTRP00000079358	ENSPTRP00000015076	ENSPTRP00000079358	Developmentally regulated GTP binding protein 2.	annotation not available	0.978
DRG2	GCN1	ENSPTRP00000015076	ENSPTRP00000009376	Developmentally regulated GTP binding protein 2.	GCN1 general control of amino-acid synthesis 1-like 1.	0.836
DRG2	RWDD1	ENSPTRP00000015076	ENSPTRP00000031647	Developmentally regulated GTP binding protein 2.	RWD domain containing 1.	0.978
EEF2	ABCF3	ENSPTRP00000017487	ENSPTRP00000026982	Eukaryotic translation elongation factor 2.	ATP-binding cassette, sub-family F (GCN20), member 3.	0.675
EEF2	EIF2AK4	ENSPTRP00000017487	ENSPTRP00000011798	Eukaryotic translation elongation factor 2.	Eukaryotic translation initiation factor 2 alpha kinase 4.	0.520
EEF2	EPRS1	ENSPTRP00000017487	ENSPTRP00000092889	Eukaryotic translation elongation factor 2.	EPRS isoform 1.	0.928
EEF2	GCN1	ENSPTRP00000017487	ENSPTRP00000009376	Eukaryotic translation elongation factor 2.	GCN1 general control of amino-acid synthesis 1-like 1.	0.849
EIF2AK4	ABCF3	ENSPTRP00000011798	ENSPTRP00000026982	Eukaryotic translation initiation factor 2 alpha kinase 4.	ATP-binding cassette, sub-family F (GCN20), member 3.	0.724
EIF2AK4	EEF2	ENSPTRP00000011798	ENSPTRP00000017487	Eukaryotic translation initiation factor 2 alpha kinase 4.	Eukaryotic translation elongation factor 2.	0.520
EIF2AK4	EPRS1	ENSPTRP00000011798	ENSPTRP00000092889	Eukaryotic translation initiation factor 2 alpha kinase 4.	EPRS isoform 1.	0.609
EIF2AK4	GCN1	ENSPTRP00000011798	ENSPTRP00000009376	Eukaryotic translation initiation factor 2 alpha kinase 4.	GCN1 general control of amino-acid synthesis 1-like 1.	0.920