STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLFM4OLFM4 isoform 1. (510 aa)    
Predicted Functional Partners:
PCDH17
PCDH17 isoform 1.
      
 0.786
MMP8
Matrix metallopeptidase 8.
   
  
 0.742
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 
 0.691
CDH17
CDH17 isoform 1.
      
 0.651
CEACAM8
Carcinoembryonic antigen related cell adhesion molecule 8.
   
 
 0.640
LTF
Lactotransferrin; Belongs to the transferrin family.
   
 
 0.636
LCN2-2
LCN2 isoform 5; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.631
LCN2
Lipocalin 2.
   
  
 0.631
BTAF1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa.
      
 0.598
C4H4orf33
Chromosome 4 open reading frame 33.
      
 0.586
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.