STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO7LMO7 isoform 2. (1668 aa)    
Predicted Functional Partners:
EMD
EMD isoform 1.
    
 
 0.830
FBXO47
F-box protein 47.
      
 0.787
FBXO48
F-box protein 48.
      
 0.775
COMMD6
COMMD6 isoform 12.
     
 0.729
ENSPTRP00000083082
annotation not available
     
 0.729
IL4I1
Amine oxidase.
   
  
 0.720
AHNAK2
AHNAK2 isoform 3.
    
 
 0.702
RTL1
RTL1 isoform 1.
   
  
 0.690
AFDN
Afadin, adherens junction formation factor.
    
 
 0.674
CENPF
Centromere protein F, 350/400kDa (Mitosin).
      
 0.649
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.