| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DISP1 | SHH | ENSPTRP00000003373 | ENSPTRP00000075730 | Dispatched RND transporter family member 1. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.993 |
| DISP1 | SIX3 | ENSPTRP00000003373 | ENSPTRP00000020406 | Dispatched RND transporter family member 1. | SIX homeobox 3. | 0.650 |
| DISP1 | ZIC2 | ENSPTRP00000003373 | ENSPTRP00000010200 | Dispatched RND transporter family member 1. | ZIC2 isoform 1. | 0.647 |
| EFHD1 | ZIC2 | ENSPTRP00000064927 | ENSPTRP00000010200 | EF-hand domain family, member D1. | ZIC2 isoform 1. | 0.596 |
| EFNA5 | ZIC2 | ENSPTRP00000029298 | ENSPTRP00000010200 | EFNA5 isoform 1; Belongs to the ephrin family. | ZIC2 isoform 1. | 0.585 |
| FOXD1 | ZIC2 | ENSPTRP00000092131 | ENSPTRP00000010200 | FOXD1 isoform 1. | ZIC2 isoform 1. | 0.579 |
| GLI2 | SHH | ENSPTRP00000040313 | ENSPTRP00000075730 | GLI family zinc finger 2. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.910 |
| GLI2 | SIX3 | ENSPTRP00000040313 | ENSPTRP00000020406 | GLI family zinc finger 2. | SIX homeobox 3. | 0.506 |
| GLI2 | ZIC2 | ENSPTRP00000040313 | ENSPTRP00000010200 | GLI family zinc finger 2. | ZIC2 isoform 1. | 0.648 |
| MEIS1 | ZIC2 | ENSPTRP00000066582 | ENSPTRP00000010200 | MEIS1 isoform 7. | ZIC2 isoform 1. | 0.609 |
| POC5 | ZIC2 | ENSPTRP00000029114 | ENSPTRP00000010200 | POC5 centriolar protein homolog. | ZIC2 isoform 1. | 0.576 |
| SHH | DISP1 | ENSPTRP00000075730 | ENSPTRP00000003373 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Dispatched RND transporter family member 1. | 0.993 |
| SHH | GLI2 | ENSPTRP00000075730 | ENSPTRP00000040313 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | GLI family zinc finger 2. | 0.910 |
| SHH | SIX3 | ENSPTRP00000075730 | ENSPTRP00000020406 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | SIX homeobox 3. | 0.700 |
| SHH | ZIC2 | ENSPTRP00000075730 | ENSPTRP00000010200 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | ZIC2 isoform 1. | 0.650 |
| SIX3 | DISP1 | ENSPTRP00000020406 | ENSPTRP00000003373 | SIX homeobox 3. | Dispatched RND transporter family member 1. | 0.650 |
| SIX3 | GLI2 | ENSPTRP00000020406 | ENSPTRP00000040313 | SIX homeobox 3. | GLI family zinc finger 2. | 0.506 |
| SIX3 | SHH | ENSPTRP00000020406 | ENSPTRP00000075730 | SIX homeobox 3. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.700 |
| SIX3 | ZIC2 | ENSPTRP00000020406 | ENSPTRP00000010200 | SIX homeobox 3. | ZIC2 isoform 1. | 0.735 |
| ZIC2 | DISP1 | ENSPTRP00000010200 | ENSPTRP00000003373 | ZIC2 isoform 1. | Dispatched RND transporter family member 1. | 0.647 |
