STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4ATransmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (811 aa)    
Predicted Functional Partners:
CHMP3
Charged multivesicular body protein 3 isoform X1.
   
 0.876
CHMP2A
Charged multivesicular body protein 2A.
   
 0.866
PTPN23
Protein tyrosine phosphatase, non-receptor type 23.
   
 0.787
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.765
VPS4A
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
   
 0.765
CK820_G0048024
CHMP6 isoform 1.
    
 0.755
C17H17orf75
Chromosome 17 open reading frame 75.
    
 0.755
CHMP7
Charged multivesicular body protein 7.
    
 0.719
VPS36
Vacuolar protein sorting 36 homolog.
    
 0.714
IST1
IST1 factor associated with ESCRT-III.
    
 0.714
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.