STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTSSASerine palmitoyltransferase small subunit A. (71 aa)    
Predicted Functional Partners:
SPTLC2
Serine palmitoyltransferase, long chain base subunit 2.
    
 0.991
SPTLC1
Aminotran_1_2 domain-containing protein.
    
 0.989
ORMDL3
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 0.971
SPTLC3
Serine palmitoyltransferase, long chain base subunit 3.
    
 0.964
ORMDL1
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 0.868
ORMDL2
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 0.853
SPTSSB
Serine palmitoyltransferase small subunit B.
  
  
0.722
ISM1
Isthmin 1 homolog (Zebrafish).
    
 0.708
ISM2
ISM2 isoform 4.
    
 0.614
GOLGA7B
Golgin A7 family member B.
     
 0.595
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.