TDRD9 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TDRD9

Tudor domain containing 9. (1382 aa)

Predicted Functional Partners:

PIWIL4

0.975

MAEL

0.951

PIWIL3

0.924

ITSN2

0.923

TDRKH

0.915

PIWIL1

0.910

PIWIL2

0.904

ASZ1

0.810

TDRD5

0.763

TDRD7

0.746

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ1	MAEL	ENSPTRP00000033595	ENSPTRP00000051583	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Maelstrom spermatogenic transposon silencer.	0.529
ASZ1	PIWIL1	ENSPTRP00000033595	ENSPTRP00000009580	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.	0.547
ASZ1	PIWIL2	ENSPTRP00000033595	ENSPTRP00000067214	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.	0.937
ASZ1	PIWIL3	ENSPTRP00000033595	ENSPTRP00000024412	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Piwi like RNA-mediated gene silencing 3; Belongs to the argonaute family.	0.504
ASZ1	PIWIL4	ENSPTRP00000033595	ENSPTRP00000087625	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Piwi like RNA-mediated gene silencing 4; Belongs to the argonaute family.	0.539
ASZ1	TDRD5	ENSPTRP00000033595	ENSPTRP00000002888	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Tudor domain containing 5.	0.593
ASZ1	TDRD7	ENSPTRP00000033595	ENSPTRP00000046673	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Tudor domain containing 7.	0.405
ASZ1	TDRD9	ENSPTRP00000033595	ENSPTRP00000011546	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Tudor domain containing 9.	0.810
ASZ1	TDRKH	ENSPTRP00000033595	ENSPTRP00000064856	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	Tudor and KH domain containing.	0.696
ITSN2	TDRD9	ENSPTRP00000020124	ENSPTRP00000011546	ITSN2 isoform 1.	Tudor domain containing 9.	0.923
MAEL	ASZ1	ENSPTRP00000051583	ENSPTRP00000033595	Maelstrom spermatogenic transposon silencer.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	0.529
MAEL	PIWIL1	ENSPTRP00000051583	ENSPTRP00000009580	Maelstrom spermatogenic transposon silencer.	Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.	0.729
MAEL	PIWIL2	ENSPTRP00000051583	ENSPTRP00000067214	Maelstrom spermatogenic transposon silencer.	Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.	0.765
MAEL	PIWIL3	ENSPTRP00000051583	ENSPTRP00000024412	Maelstrom spermatogenic transposon silencer.	Piwi like RNA-mediated gene silencing 3; Belongs to the argonaute family.	0.540
MAEL	PIWIL4	ENSPTRP00000051583	ENSPTRP00000087625	Maelstrom spermatogenic transposon silencer.	Piwi like RNA-mediated gene silencing 4; Belongs to the argonaute family.	0.942
MAEL	TDRD5	ENSPTRP00000051583	ENSPTRP00000002888	Maelstrom spermatogenic transposon silencer.	Tudor domain containing 5.	0.512
MAEL	TDRD9	ENSPTRP00000051583	ENSPTRP00000011546	Maelstrom spermatogenic transposon silencer.	Tudor domain containing 9.	0.951
MAEL	TDRKH	ENSPTRP00000051583	ENSPTRP00000064856	Maelstrom spermatogenic transposon silencer.	Tudor and KH domain containing.	0.922
PIWIL1	ASZ1	ENSPTRP00000009580	ENSPTRP00000033595	Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the p [...]	0.547
PIWIL1	MAEL	ENSPTRP00000009580	ENSPTRP00000051583	Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.	Maelstrom spermatogenic transposon silencer.	0.729