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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP8B4Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1192 aa)    
Predicted Functional Partners:
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.827
DEPDC7
DEP domain containing 7.
      
 0.817
SLC27A2
Solute carrier family 27 member 2.
   
  
 0.747
ABTB2
Ankyrin repeat and BTB (POZ) domain containing 2.
     
 0.731
FLRT3
Fibronectin leucine rich transmembrane protein 3.
    
 
 0.678
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.644
GCFC2
GC-rich sequence DNA-binding factor 2.
      
 0.600
PAXBP1
GC-rich sequence DNA-binding factor 1.
      
 0.600
LOC739776
Cell cycle control protein 50C; Belongs to the CDC50/LEM3 family.
   
 0.561
ATP1B1
Sodium/potassium-transporting ATPase subunit beta-1; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity).
   
 0.557
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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