TRAP1 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYCS	TRAP1	ENSPTRP00000032465	ENSPTRP00000013166	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity).	TNF receptor-associated protein 1.	0.911
ENSPTRP00000068695	TRAP1	ENSPTRP00000068695	ENSPTRP00000013166	annotation not available	TNF receptor-associated protein 1.	0.911
ENSPTRP00000089993	HSPA9	ENSPTRP00000089993	ENSPTRP00000029565	annotation not available	Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family.	0.561
ENSPTRP00000089993	LOC459970	ENSPTRP00000089993	ENSPTRP00000079546	annotation not available	Stress-70 protein, mitochondrial pseudogene.	0.561
ENSPTRP00000089993	TRAP1	ENSPTRP00000089993	ENSPTRP00000013166	annotation not available	TNF receptor-associated protein 1.	0.803
HSP90B1	HSPA9	ENSPTRP00000077551	ENSPTRP00000029565	Heat shock protein 90 beta family member 1.	Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family.	0.561
HSP90B1	LOC459970	ENSPTRP00000077551	ENSPTRP00000079546	Heat shock protein 90 beta family member 1.	Stress-70 protein, mitochondrial pseudogene.	0.561
HSP90B1	TRAP1	ENSPTRP00000077551	ENSPTRP00000013166	Heat shock protein 90 beta family member 1.	TNF receptor-associated protein 1.	0.803
HSPA9	ENSPTRP00000089993	ENSPTRP00000029565	ENSPTRP00000089993	Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family.	annotation not available	0.561
HSPA9	HSP90B1	ENSPTRP00000029565	ENSPTRP00000077551	Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family.	Heat shock protein 90 beta family member 1.	0.561
HSPA9	TRAP1	ENSPTRP00000029565	ENSPTRP00000013166	Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family.	TNF receptor-associated protein 1.	0.888
LOC104002760	TRAP1	ENSPTRP00000082320	ENSPTRP00000013166	Cytochrome c.	TNF receptor-associated protein 1.	0.911
LOC107972317	TRAP1	ENSPTRP00000064294	ENSPTRP00000013166	Cytochrome c-like.	TNF receptor-associated protein 1.	0.911
LOC459970	ENSPTRP00000089993	ENSPTRP00000079546	ENSPTRP00000089993	Stress-70 protein, mitochondrial pseudogene.	annotation not available	0.561
LOC459970	HSP90B1	ENSPTRP00000079546	ENSPTRP00000077551	Stress-70 protein, mitochondrial pseudogene.	Heat shock protein 90 beta family member 1.	0.561
LOC459970	TRAP1	ENSPTRP00000079546	ENSPTRP00000013166	Stress-70 protein, mitochondrial pseudogene.	TNF receptor-associated protein 1.	0.888
LOC742456	TRAP1	ENSPTRP00000093429	ENSPTRP00000013166	Cytochrome c-like.	TNF receptor-associated protein 1.	0.911
SF3A2	TRAP1	ENSPTRP00000017387	ENSPTRP00000013166	Splicing factor 3a, subunit 2, 66kDa.	TNF receptor-associated protein 1.	0.807
TRAP1	CYCS	ENSPTRP00000013166	ENSPTRP00000032465	TNF receptor-associated protein 1.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity).	0.911
TRAP1	ENSPTRP00000068695	ENSPTRP00000013166	ENSPTRP00000068695	TNF receptor-associated protein 1.	annotation not available	0.911