STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX6T-box transcription factor 6. (443 aa)    
Predicted Functional Partners:
MSGN1
MSGN1 isoform 1.
   
 0.837
MESP2
Mesoderm posterior bHLH transcription factor 2.
    
 0.817
ENSPTRP00000062011
annotation not available
    
 0.817
WNT3A
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.781
TMEM70
Transmembrane protein 70.
    
 
 0.752
TMEM260
Chromosome 14 open reading frame 101.
      
 0.750
TCTN1
Tectonic family member 1.
      
 0.749
ARHGAP31
Rho GTPase activating protein 31.
      
 0.742
ALKBH8
ALKBH8 isoform 2.
      
 0.742
NHEJ1
Non-homologous end joining factor 1.
      
 0.741
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.