STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF1CTATA-box binding protein associated factor, RNA polymerase I subunit C. (869 aa)    
Predicted Functional Partners:
TAF1A
TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa.
    
 0.996
TAF1D
TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa.
    
 0.996
TBP
TBP isoform 1.
    
 0.993
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.832
TBPL2
TATA box-binding protein-like protein 2; Transcription factor required in complex with TAF3 for the differentiation of myoblasts into myocytes. The complex replaces TFIID at specific promoters at an early stage in the differentiation process (By similarity).
    
 0.791
UBTF
Upstream binding transcription factor, RNA polymerase I.
    
 0.768
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.715
POLR1E
RNA polymerase I subunit E.
   
 
 0.714
TWISTNB
TWISTNB isoform 1.
     
 0.665
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.659
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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