STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRM3Mitochondrial rRNA methyltransferase 3. (420 aa)    
Predicted Functional Partners:
DDX28
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
  
 
 0.945
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
   
 
 0.932
MRPS30
Mitochondrial ribosomal protein S30.
    
 
 0.892
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.891
MRPL39
Mitochondrial ribosomal protein L39.
  
 
 0.888
MTG1
Mitochondrial ribosome-associated GTPase 1 isoform X1.
  
 
 0.870
MRPL28
Mitochondrial ribosomal protein L28.
    
   0.870
MRPL4
Mitochondrial ribosomal protein L4.
  
 
 0.865
MRPL58
Mitochondrial ribosomal protein L58.
  
 
 0.858
MRPL9
Mitochondrial ribosomal protein L9.
  
 
 0.838
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.