SLC4A1 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SLC4A1

Anion exchange protein. (921 aa)

Predicted Functional Partners:

EPB42

0.984

ANK1

0.979

GYPA

0.969

GYPE1

0.958

GYPB

0.958

ENSPTRP00000028285

0.909

AHSP

0.871

RHAG

0.863

CA2

0.862

AQP1

0.836

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHSP	ENSPTRP00000028285	ENSPTRP00000013755	ENSPTRP00000028285	Alpha hemoglobin stabilizing protein.	annotation not available	0.562
AHSP	EPB42	ENSPTRP00000013755	ENSPTRP00000011937	Alpha hemoglobin stabilizing protein.	Erythrocyte membrane protein band 4.2.	0.920
AHSP	GYPA	ENSPTRP00000013755	ENSPTRP00000028288	Alpha hemoglobin stabilizing protein.	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	0.532
AHSP	GYPB	ENSPTRP00000013755	ENSPTRP00000087172	Alpha hemoglobin stabilizing protein.	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	0.532
AHSP	GYPE1	ENSPTRP00000013755	ENSPTRP00000054415	Alpha hemoglobin stabilizing protein.	GYPA isoform 5.	0.532
AHSP	SLC4A1	ENSPTRP00000013755	ENSPTRP00000015769	Alpha hemoglobin stabilizing protein.	Anion exchange protein.	0.871
ANK1	AQP1	ENSPTRP00000045732	ENSPTRP00000032543	ANK1 isoform 1.	Aquaporin-1 isoform X2.	0.791
ANK1	ENSPTRP00000028285	ENSPTRP00000045732	ENSPTRP00000028285	ANK1 isoform 1.	annotation not available	0.678
ANK1	EPB42	ENSPTRP00000045732	ENSPTRP00000011937	ANK1 isoform 1.	Erythrocyte membrane protein band 4.2.	0.766
ANK1	GYPA	ENSPTRP00000045732	ENSPTRP00000028288	ANK1 isoform 1.	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	0.838
ANK1	GYPB	ENSPTRP00000045732	ENSPTRP00000087172	ANK1 isoform 1.	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	0.838
ANK1	GYPE1	ENSPTRP00000045732	ENSPTRP00000054415	ANK1 isoform 1.	GYPA isoform 5.	0.838
ANK1	RHAG	ENSPTRP00000045732	ENSPTRP00000031201	ANK1 isoform 1.	RHAG isoform 2; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.	0.939
ANK1	SLC4A1	ENSPTRP00000045732	ENSPTRP00000015769	ANK1 isoform 1.	Anion exchange protein.	0.979
AQP1	ANK1	ENSPTRP00000032543	ENSPTRP00000045732	Aquaporin-1 isoform X2.	ANK1 isoform 1.	0.791
AQP1	ENSPTRP00000028285	ENSPTRP00000032543	ENSPTRP00000028285	Aquaporin-1 isoform X2.	annotation not available	0.496
AQP1	EPB42	ENSPTRP00000032543	ENSPTRP00000011937	Aquaporin-1 isoform X2.	Erythrocyte membrane protein band 4.2.	0.509
AQP1	GYPA	ENSPTRP00000032543	ENSPTRP00000028288	Aquaporin-1 isoform X2.	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	0.696
AQP1	GYPB	ENSPTRP00000032543	ENSPTRP00000087172	Aquaporin-1 isoform X2.	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	0.696
AQP1	GYPE1	ENSPTRP00000032543	ENSPTRP00000054415	Aquaporin-1 isoform X2.	GYPA isoform 5.	0.696