STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB4HOXB4 isoform 1. (251 aa)    
Predicted Functional Partners:
HOXB5
HOXB5 isoform 1.
   
 
0.931
HOXB3
HOXB3 isoform 13.
   
  
0.855
ENSPTRP00000080279
annotation not available
   
 
0.850
HOXB6
HOXB6 isoform 1.
   
 
0.843
HOXD4
Homeobox protein Hox-D4; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Deformed subfamily.
  
 
0.806
HOXC6
HOXC6 isoform 1.
   
 
0.795
HOXC5
HOXC5 isoform 1.
   
 
0.783
HOXC4
HOXC4 isoform 1.
  
 
0.782
HOXA7
Homeobox protein Hox-A7; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family.
  
 
0.750
HOXA7-2
Homeobox A7.
  
 
0.750
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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