STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMP1Vacuole membrane protein 1. (401 aa)    
Predicted Functional Partners:
BECN1
Beclin 1, autophagy related.
    
 0.967
BECN2
BECN2 isoform 1.
    
 0.932
TP53INP2
Tumor protein p53 inducible nuclear protein 2.
     
 0.916
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.696
BECN1-2
BECN1 isoform 3.
    
 
 0.691
TMEM41B
Transmembrane protein 41B.
    
 
 0.659
SBNO2
SBNO2 isoform 2.
      
 0.629
WIPI1
WD repeat domain, phosphoinositide interacting 1.
      
 0.558
ATG101
Chromosome 12 open reading frame 44.
      
 0.546
PIK3R4
Phosphoinositide-3-kinase, regulatory subunit 4.
      
 0.543
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.